Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905921.1_cds_XP_016456202.1_50062
CDS Infomation

[gene=LOC107780186] [db_xref=GeneID:107780186] [protein=putative late blight resistance protein homolog R1A-10 isoform X1] [protein_id=XP_016456202.1] [location=join(122497..124218,126916..126930)] [gbkey=CDS]
Sequence

ATGGCTTATGCTGCTACTTATTCACTTATGCATACACTGGAGCAACTCTTGCAGTGTAAA
TCACTTTTAATTTATAGAAGTTGTATACAACAACATCTTGAATCTGCTTTTCAAAGTCTT
TCTTCTCTTCAAGTTTTTCTTGAGTATACTTCAAAGGAAATCAAAGATATTGAAACTTTG
AAGACTATAGAAAAACGGATCAGAGATATAGTCTACAAAGCAGAAGAGAGAGTTGATTCA
GCCCTTAGAAGAATAATCATTCTAGTAGATCAACAGAAACGAGAACGGGCTTGTAAATCC
TTCAATGAGGAATTGCAAAAAGTGGAAAAAGAAGTTGATTCTCTAAGGAAAGAACTGATG
GAGATCGAGTTTATCAAGCATGGAACCAAATCTGCAGAAGCAAGTACTTCTACCTCATCA
AAAAGGTATGCGACCGAGCAACATACTGTTGTTGGGATGAAAGATGACTTCAACACCATA
CTAGATCGTCTCACTGCCCAAACAGATCAGCTAACTGTCATACCAGTTGTTGGTATGGGC
GGTATAGGTAAGACAACTCTTGCTAGAAAAGTTTATGATGATTCAACAATCCGTTATAGA
TTTGATAAACATGCATGGGTAACTATCTCTCAAGTTTATAACGAGAGACAAATTCTTCTT
GAACTTGTCTCTTCTATTAGCCAGGATAAGACTGATGAAAGTAATCAAAAAATGAGCAAT
GATCAACTAGCGGAGATTGTGTATAGAGGTGTGATTGGTAGGAGATTTTTAATTGTCATA
GATGATCTTTGGAGTACTGAGGCTTTGGATCAAATACAAAGAATATTCCCAAATGAGAAC
AATAGAAGTCGAATCCTATTAACTACTCGCCTCAGTTATGTGGCTGATTATGCAAGCCCT
GATTTTCCTCATCATAATATGTCTTTTCTAAGTTTTGATGAGAGTTGGATTCTATTTACC
GAAAGACTTCTTAGAGAAGACATATGTCCTCCTCACCTAGATGAAATTGGGAAGCATATC
ATACAGCAATGCCGAGGATTACCTCTCTCGATTGTTGTCGTTGCTGGACTTCTTGGAAAG
ATAGATCCGACCCGTGACAATTGGAAGAAAGTTGAGGAAAATTTGAACTCATTCTTTGGT
ACGGTATCTGAACGGTGTCAATCAATTCTTTCATTGAGCTACAGTTACTTGCCCCAATAT
TTGAAGGCTTGTTTTCTCTATGTTGGAGGTTTTCCTGAAGATATGGAGATTGGTGTTTCA
AAGTTGATTAAACTATGGATTGCTGAGCTATTTGTAAGAGCAAGAAGCAATAAAAAGTTA
GAAATGGTGGCAGAGGAGTATCTAGAAGAGCTAATTGACAGAAGTCTAATTTTGGCTGGT
ACACGAAGGGCTAATGGAAAGATGAAAACTTGCAAAATTCATGATCTTCTTCGGCAGCTC
TGCATAAGAGAAGCTCAAATTGAGAATTTTGTGCATGTCCTGAGTGATAGTGACCACATT
TCCTCAGAAAGCATAAAGTATCAACGGCGAGCGATGCTTTCACTTGGCAATCATTGGAAT
CATTTATATGTTCCAAGGCATTGGAGTGGTCTTACGAGTACAACCAGCAGCTTGGTTTTT
ACGGGCTATTCTTTTCAAGTTTATCTAATGCCTCAATTTGTTTCACAGTTCAAGCTGCTT
AAGGTGTTGGATGTATCTTCAATCAATTATAGTTTCTCTTGGGAAGAACAGGAATGA

Peptide Sequence

PEP ID

XP_016456202.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1A-10 isoform X1 [Nicotiana tabacum]
Sequence

MAYAATYSLMHTLEQLLQCKSLLIYRSCIQQHLESAFQSLSSLQVFLEYTSKEIKDIETL
KTIEKRIRDIVYKAEERVDSALRRIIILVDQQKRERACKSFNEELQKVEKEVDSLRKELM
EIEFIKHGTKSAEASTSTSSKRYATEQHTVVGMKDDFNTILDRLTAQTDQLTVIPVVGMG
GIGKTTLARKVYDDSTIRYRFDKHAWVTISQVYNERQILLELVSSISQDKTDESNQKMSN
DQLAEIVYRGVIGRRFLIVIDDLWSTEALDQIQRIFPNENNRSRILLTTRLSYVADYASP
DFPHHNMSFLSFDESWILFTERLLREDICPPHLDEIGKHIIQQCRGLPLSIVVVAGLLGK
IDPTRDNWKKVEENLNSFFGTVSERCQSILSLSYSYLPQYLKACFLYVGGFPEDMEIGVS
KLIKLWIAELFVRARSNKKLEMVAEEYLEELIDRSLILAGTRRANGKMKTCKIHDLLRQL
CIREAQIENFVHVLSDSDHISSESIKYQRRAMLSLGNHWNHLYVPRHWSGLTSTTSSLVF
TGYSFQVYLMPQFVSQFKLLKVLDVSSINYSFSWEEQE

Transcript Sequence

Gene sequence data has not been registered.